PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02280.1.g00010.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 262aa    MW: 29175.6 Da    PI: 10.2517
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02280.1.g00010.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.9e-33108166159
                                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d  vv++tYeg+H+h+
  Zpz_sc02280.1.g00010.1.am.mk 108 LDDGYRWRKYGQKAVKNNRFPRSYYRCTHQGCNVKKQVQRLSKDDGVVVTTYEGTHTHP 166
                                   59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.5E-3393166IPR003657WRKY domain
SuperFamilySSF1182901.7E-29100167IPR003657WRKY domain
PROSITE profilePS5081129.941103168IPR003657WRKY domain
SMARTSM007743.8E-39108167IPR003657WRKY domain
PfamPF031068.1E-27109166IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MESNYHPMLF VTQPFSSTSS SHHFMAGSGT SSHDHDRRGS FLGAPSNSKE GYGASLPGRR  60
DDIQETPAGG PAGDDADRSG GVAGKKKGAK KERRPKYAFQ TRSAVDVLDD GYRWRKYGQK  120
AVKNNRFPRS YYRCTHQGCN VKKQVQRLSK DDGVVVTTYE GTHTHPIEKS NDNFEHILTQ  180
MQIYSGVGGS GFSSSPMFPQ RWNQPDGHVP LRHRPHATAE EFVACPPHPP PLHLPLLLLV  240
QAARARSSLI QSRSIHPYPF RR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-2598167776Probable WRKY transcription factor 4
2lex_A2e-2598167776Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3683634e-88EF368363.1 Triticum aestivum WRKY transcription factor (WRKY72-b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004979296.19e-83PREDICTED: probable WRKY transcription factor 75
TrEMBLK3ZJV41e-82K3ZJV4_SETIT; Uncharacterized protein
STRINGSi026859m3e-82(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110038133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.14e-54WRKY DNA-binding protein 75